Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
KPNA4O00629 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.06■□□□□ 0.16
KPNA4O00629 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.06■□□□□ 0.16
KPNA4O00629 RN7SL850P-201ENST00000579959 291 ntBASIC16.06■□□□□ 0.16
KPNA4O00629 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KPNA4O00629 AC083849.1-201ENST00000615227 514 ntBASIC16.06■□□□□ 0.16
KPNA4O00629 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 AC132872.4-202ENST00000622924 2756 ntBASIC16.06■□□□□ 0.16
KPNA4O00629 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KPNA4O00629 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.06■□□□□ 0.16
KPNA4O00629 LYSMD4-203ENST00000378904 2122 ntBASIC16.06■□□□□ 0.16
KPNA4O00629 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
KPNA4O00629 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.06■□□□□ 0.16
KPNA4O00629 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KPNA4O00629 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
KPNA4O00629 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KPNA4O00629 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.05■□□□□ 0.16
KPNA4O00629 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.05■□□□□ 0.16
KPNA4O00629 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KPNA4O00629 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KPNA4O00629 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
KPNA4O00629 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.04■□□□□ 0.16
KPNA4O00629 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KPNA4O00629 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.04■□□□□ 0.16
KPNA4O00629 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KPNA4O00629 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.04■□□□□ 0.16
KPNA4O00629 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.04■□□□□ 0.16
KPNA4O00629 SPDYE13P-201ENST00000445314 798 ntBASIC16.04■□□□□ 0.16
KPNA4O00629 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.04■□□□□ 0.16
KPNA4O00629 AL671277.2-201ENST00000458060 996 ntBASIC16.04■□□□□ 0.16
KPNA4O00629 AC063952.2-201ENST00000498792 1227 ntBASIC16.04■□□□□ 0.16
KPNA4O00629 AC022616.7-201ENST00000525383 220 ntBASIC16.04■□□□□ 0.16
KPNA4O00629 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.04■□□□□ 0.16
KPNA4O00629 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.04■□□□□ 0.16
KPNA4O00629 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.04■□□□□ 0.16
KPNA4O00629 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KPNA4O00629 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.04■□□□□ 0.16
KPNA4O00629 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
KPNA4O00629 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms