Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PMS2P1-201ENST00000431037 1228 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HNRNPDP1-201ENST00000439535 754 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TNRC18P3-201ENST00000441896 2691 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NKAPP1-205ENST00000585790 367 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AL049840.3-201ENST00000602669 611 ntBASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC243591.1-201ENST00000452967 1364 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MIR940-201ENST00000401276 94 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 AC103564.2-201ENST00000432853 1299 ntBASIC13.76□□□□□ -0.21
TCRBV4S1A1TA0A5B7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms