Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 CYP2D8P-201ENST00000433633 1490 ntBASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.98□□□□□ -0.17
DUXBA0A1W2PPF3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 AL049757.1-201ENST00000616842 1596 ntBASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 ME2P1-201ENST00000426028 1970 ntBASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 AL031432.5-201ENST00000641059 760 ntBASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 AL645728.1-201ENST00000366221 2101 ntBASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 AL135999.2-201ENST00000622438 1686 ntBASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
DUXBA0A1W2PPF3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 AL355075.4-201ENST00000554988 638 ntBASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 AL662844.4-201ENST00000606367 2838 ntBASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
DUXBA0A1W2PPF3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
DUXBA0A1W2PPF3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.95□□□□□ -0.18
DUXBA0A1W2PPF3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DUXBA0A1W2PPF3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms