Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 RNU1-129P-201ENST00000384064 167 ntBASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AC069335.1-201ENST00000489972 472 ntBASIC17.75■□□□□ 0.43
YIPF1Q9Y548 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 U1.21-201ENST00000580816 167 ntBASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AL031055.1-201ENST00000606362 631 ntBASIC17.75■□□□□ 0.43
YIPF1Q9Y548 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 MIR770-201ENST00000390219 98 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 KRT18P32-201ENST00000424695 1287 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 SPCS2P4-201ENST00000436160 681 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC087641.1-201ENST00000557561 1021 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 AC093512.1-201ENST00000617969 520 ntBASIC17.74■□□□□ 0.43
YIPF1Q9Y548 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
YIPF1Q9Y548 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YIPF1Q9Y548 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms