Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRIT1Q9P2V4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRIT1Q9P2V4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRIT1Q9P2V4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.49■□□□□ 0.23
LRIT1Q9P2V4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 AC140658.5-201ENST00000438532 169 ntBASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 MIR4515-201ENST00000584082 81 ntBASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRIT1Q9P2V4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AL671277.1-201ENST00000429656 993 ntBASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AC004449.1-201ENST00000564240 433 ntBASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AC022145.2-201ENST00000598203 171 ntBASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 GNAS-203ENST00000306120 1878 ntBASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRIT1Q9P2V4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 TIMM8BP1-201ENST00000452384 211 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AC005412.3-201ENST00000580309 715 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AC026120.1-201ENST00000611536 926 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AC106028.4-201ENST00000614509 607 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 AC093028.1-201ENST00000622998 982 ntBASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRIT1Q9P2V4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms