Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 FZD10-202ENST00000539839 3282 ntBASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.77■□□□□ 0.91
HMG20BQ9P0W2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 PDPK2P-202ENST00000562415 1191 ntBASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20BQ9P0W2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 ALG1L5P-201ENST00000482043 771 ntBASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20BQ9P0W2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 MIR3687-2-201ENST00000577708 61 ntBASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 MIR3687-1-201ENST00000614492 61 ntBASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 REXO1L3P-201ENST00000622202 1288 ntBASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HMG20BQ9P0W2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
HMG20BQ9P0W2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.73■□□□□ 0.91
HMG20BQ9P0W2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HMG20BQ9P0W2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.73■□□□□ 0.91
HMG20BQ9P0W2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms