Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 AL020989.1-201ENST00000422979 469 ntBASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 AC074051.2-201ENST00000565115 352 ntBASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRTM1Q9HBL6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 AC148477.5-201ENST00000625164 1645 ntBASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 POM121L3P-201ENST00000419331 1163 ntBASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 AP000867.4-201ENST00000641616 219 ntBASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 AC092171.3-201ENST00000610122 2651 ntBASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.46■□□□□ 0.23
LRTM1Q9HBL6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM1Q9HBL6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM1Q9HBL6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRTM1Q9HBL6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.46■□□□□ 0.22
LRTM1Q9HBL6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.46■□□□□ 0.22
LRTM1Q9HBL6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LRTM1Q9HBL6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms