Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.41■□□□□ 0.22
PIF1Q9H611 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.41■□□□□ 0.22
PIF1Q9H611 AC011558.1-201ENST00000623459 338 ntBASIC16.41■□□□□ 0.22
PIF1Q9H611 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
PIF1Q9H611 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.41■□□□□ 0.22
PIF1Q9H611 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.41■□□□□ 0.22
PIF1Q9H611 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.41■□□□□ 0.22
PIF1Q9H611 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
PIF1Q9H611 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.41■□□□□ 0.22
PIF1Q9H611 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 AC006449.5-201ENST00000610658 2098 ntBASIC16.41■□□□□ 0.22
PIF1Q9H611 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
PIF1Q9H611 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PIF1Q9H611 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
PIF1Q9H611 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.4■□□□□ 0.22
PIF1Q9H611 AK4P3-201ENST00000418260 669 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 AC096633.1-201ENST00000422446 749 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 AC002558.1-201ENST00000488906 803 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 AC109462.3-201ENST00000573934 613 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 AC139887.4-201ENST00000607877 719 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 FLJ16779-201ENST00000612722 7638 ntBASIC16.4■□□□□ 0.22
PIF1Q9H611 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.4■□□□□ 0.22
PIF1Q9H611 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.4■□□□□ 0.22
PIF1Q9H611 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PIF1Q9H611 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PIF1Q9H611 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
PIF1Q9H611 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PIF1Q9H611 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.39■□□□□ 0.22
PIF1Q9H611 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.39■□□□□ 0.21
PIF1Q9H611 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 TMPOP1-202ENST00000424642 1267 ntBASIC16.39■□□□□ 0.21
PIF1Q9H611 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.39■□□□□ 0.21
PIF1Q9H611 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PIF1Q9H611 KRT18P57-201ENST00000443599 1254 ntBASIC16.39■□□□□ 0.21
PIF1Q9H611 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.39■□□□□ 0.21
PIF1Q9H611 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.39■□□□□ 0.21
PIF1Q9H611 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.39■□□□□ 0.21
PIF1Q9H611 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PIF1Q9H611 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.39■□□□□ 0.21
PIF1Q9H611 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PIF1Q9H611 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms