Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP4Q9C0A0 AC104581.1-202ENST00000635932 2618 ntBASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 API5-211ENST00000534695 560 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 AL132655.2-201ENST00000596276 594 ntBASIC21.28■■□□□ 1
CNTNAP4Q9C0A0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 FRMD8P1-201ENST00000440433 1524 ntBASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP4Q9C0A0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 AL353705.2-201ENST00000428243 662 ntBASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 ATP5G2P4-201ENST00000442175 420 ntBASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 BANF1P1-201ENST00000553684 263 ntBASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 AC093525.9-201ENST00000624961 1746 ntBASIC21.27■□□□□ 0.99
CNTNAP4Q9C0A0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AL021920.2-201ENST00000624828 1351 ntBASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AIRN-201ENST00000601203 4374 ntBASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC140912.1-201ENST00000577171 1054 ntBASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AC004840.1-201ENST00000636359 365 ntBASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP4Q9C0A0 CETN4P-206ENST00000642099 2168 ntBASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP4Q9C0A0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms