Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.39□□□□□ -0.59
LITAFQ99732 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC11.39□□□□□ -0.59
LITAFQ99732 AL353719.1-201ENST00000566847 864 ntBASIC11.39□□□□□ -0.59
LITAFQ99732 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
LITAFQ99732 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.39□□□□□ -0.59
LITAFQ99732 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.39□□□□□ -0.59
LITAFQ99732 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LITAFQ99732 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 TCAF2P1-201ENST00000291129 2421 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 AC096633.1-201ENST00000422446 749 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 MAP2K4P1-201ENST00000438453 1195 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 AC116562.2-201ENST00000507042 360 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 MIR3917-201ENST00000580971 93 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.38□□□□□ -0.59
LITAFQ99732 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 AC023157.3-201ENST00000619086 2088 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LITAFQ99732 GPR89P-201ENST00000407924 1495 ntBASIC11.38□□□□□ -0.59
LITAFQ99732 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
LITAFQ99732 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.38□□□□□ -0.59
LITAFQ99732 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LITAFQ99732 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LITAFQ99732 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.37□□□□□ -0.59
LITAFQ99732 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.37□□□□□ -0.59
LITAFQ99732 NUDT16P1-203ENST00000513809 620 ntBASIC11.37□□□□□ -0.59
LITAFQ99732 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 RN7SL471P-201ENST00000580476 299 ntBASIC11.37□□□□□ -0.59
LITAFQ99732 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LITAFQ99732 IKBKGP1-201ENST00000612193 1073 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms