Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIPA1Q96FS4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 MIR770-201ENST00000390219 98 ntBASIC17.11■□□□□ 0.33
SIPA1Q96FS4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 AL355306.1-201ENST00000415580 579 ntBASIC17.11■□□□□ 0.33
SIPA1Q96FS4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 ADH5P3-201ENST00000433842 1137 ntBASIC17.11■□□□□ 0.33
SIPA1Q96FS4 HLA-J-203ENST00000494367 1087 ntBASIC17.11■□□□□ 0.33
SIPA1Q96FS4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIPA1Q96FS4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SPDYE11-202ENST00000450699 704 ntBASIC17.1■□□□□ 0.33
SIPA1Q96FS4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SPDYE9P-201ENST00000570642 692 ntBASIC17.1■□□□□ 0.33
SIPA1Q96FS4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SPDYE10P-202ENST00000612005 668 ntBASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SPDYE8P-202ENST00000612377 668 ntBASIC17.1■□□□□ 0.33
SIPA1Q96FS4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIPA1Q96FS4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 AC005412.3-201ENST00000580309 715 ntBASIC17.09■□□□□ 0.33
SIPA1Q96FS4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 AC099522.2-201ENST00000607001 744 ntBASIC17.09■□□□□ 0.33
SIPA1Q96FS4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 LINC00628-201ENST00000628516 1289 ntBASIC17.09■□□□□ 0.33
SIPA1Q96FS4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms