Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MIR4751-201ENST00000578027 74 ntBASIC15.16■□□□□ 0.02
APH1AQ96BI3 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
APH1AQ96BI3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
APH1AQ96BI3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.15■□□□□ 0.02
APH1AQ96BI3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 AC106730.1-201ENST00000566722 1090 ntBASIC15.15■□□□□ 0.02
APH1AQ96BI3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
APH1AQ96BI3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APH1AQ96BI3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.14■□□□□ 0.01
APH1AQ96BI3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 AC004790.2-201ENST00000623588 572 ntBASIC15.14■□□□□ 0.01
APH1AQ96BI3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APH1AQ96BI3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.14■□□□□ 0.01
APH1AQ96BI3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.13■□□□□ 0.01
APH1AQ96BI3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1AQ96BI3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
APH1AQ96BI3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
APH1AQ96BI3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.13■□□□□ 0.01
APH1AQ96BI3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
APH1AQ96BI3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1AQ96BI3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1AQ96BI3 AC139713.2-201ENST00000641328 2723 ntBASIC15.13■□□□□ 0.01
APH1AQ96BI3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1AQ96BI3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APH1AQ96BI3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms