Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 KRT18P48-201ENST00000434763 852 ntBASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CKAP2Q8WWK9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKAP2Q8WWK9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TUBB8P12-201ENST00000308911 1335 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TUBB7P-202ENST00000428444 1305 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TUBB8P7-204ENST00000567960 1332 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AL391807.1-203ENST00000604392 2365 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TSPY26P-202ENST00000565928 3884 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AC008550.1-201ENST00000511500 884 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 EGLN1P1-201ENST00000531623 762 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 AL512604.3-201ENST00000569583 964 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 DBET-201ENST00000630918 3363 ntBASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKAP2Q8WWK9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17■□□□□ 0.31
CKAP2Q8WWK9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKAP2Q8WWK9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms