Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 AC025678.2-201ENST00000562061 970 ntBASIC20.92■□□□□ 0.94
RTL9Q8NET4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 MPDU1-223ENST00000582151 728 ntBASIC20.92■□□□□ 0.94
RTL9Q8NET4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.92■□□□□ 0.94
RTL9Q8NET4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTL9Q8NET4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 PMS2P4-201ENST00000412466 1052 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 AL592309.1-201ENST00000443127 649 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 AL512356.2-201ENST00000546955 174 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 MIR4492-201ENST00000581627 80 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 AC239800.4-201ENST00000603712 296 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RTL9Q8NET4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 HCG11-201ENST00000411553 5696 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTL9Q8NET4 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
RTL9Q8NET4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 FAM58DP-201ENST00000428076 619 ntBASIC20.9■□□□□ 0.94
RTL9Q8NET4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AC124947.2-201ENST00000547118 1133 ntBASIC20.9■□□□□ 0.94
RTL9Q8NET4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTL9Q8NET4 WASH6P-202ENST00000359512 1437 ntBASIC20.9■□□□□ 0.94
RTL9Q8NET4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RTL9Q8NET4 AC007613.1-201ENST00000572811 2597 ntBASIC20.9■□□□□ 0.94
RTL9Q8NET4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTL9Q8NET4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RTL9Q8NET4 NOC2LP2-201ENST00000407594 1944 ntBASIC20.89■□□□□ 0.94
RTL9Q8NET4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
RTL9Q8NET4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTL9Q8NET4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RTL9Q8NET4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 KRT8P23-201ENST00000560090 1207 ntBASIC20.89■□□□□ 0.93
RTL9Q8NET4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.89■□□□□ 0.93
RTL9Q8NET4 AP001059.3-201ENST00000619053 235 ntBASIC20.89■□□□□ 0.93
RTL9Q8NET4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RTL9Q8NET4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 AC131009.4-201ENST00000624048 1740 ntBASIC20.89■□□□□ 0.93
RTL9Q8NET4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTL9Q8NET4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms