Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 AC092068.3-201ENST00000587894 2016 ntBASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01561Q8N1V8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC006449.5-201ENST00000610658 2098 ntBASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 RN7SL606P-201ENST00000472779 293 ntBASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC090616.6-201ENST00000582640 721 ntBASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
LINC01561Q8N1V8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 RNF152P1-201ENST00000397754 604 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 TSPY5P-201ENST00000426936 936 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC010203.1-204ENST00000548782 407 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC011840.4-201ENST00000578471 627 ntBASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01561Q8N1V8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms