Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.05■□□□□ -0
SEC61A1P61619 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.05■□□□□ -0
SEC61A1P61619 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
SEC61A1P61619 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.04■□□□□ -0
SEC61A1P61619 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 AC026691.1-201ENST00000602502 2017 ntBASIC15.04■□□□□ -0
SEC61A1P61619 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 AC104819.1-201ENST00000504587 486 ntBASIC15.04■□□□□ -0
SEC61A1P61619 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.04■□□□□ -0
SEC61A1P61619 FOSL1P1-201ENST00000511041 816 ntBASIC15.04■□□□□ -0
SEC61A1P61619 DUTP2-201ENST00000519164 463 ntBASIC15.04■□□□□ -0
SEC61A1P61619 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 AC012615.1-201ENST00000565797 1299 ntBASIC15.04■□□□□ -0
SEC61A1P61619 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SEC61A1P61619 AC138894.3-201ENST00000603787 634 ntBASIC15.04■□□□□ -0
SEC61A1P61619 AL732292.2-201ENST00000609649 430 ntBASIC15.04■□□□□ -0
SEC61A1P61619 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SEC61A1P61619 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.04■□□□□ -0
SEC61A1P61619 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.04■□□□□ -0
SEC61A1P61619 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SEC61A1P61619 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.04■□□□□ -0
SEC61A1P61619 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
SEC61A1P61619 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.04■□□□□ -0
SEC61A1P61619 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.04■□□□□ -0
SEC61A1P61619 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.03■□□□□ -0
SEC61A1P61619 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
SEC61A1P61619 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEC61A1P61619 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEC61A1P61619 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
SEC61A1P61619 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 TSPY12P-201ENST00000421279 868 ntBASIC15.03■□□□□ -0
SEC61A1P61619 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 AC008687.5-201ENST00000593746 558 ntBASIC15.03■□□□□ -0
SEC61A1P61619 Z69720.1-201ENST00000601483 472 ntBASIC15.03■□□□□ -0
SEC61A1P61619 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.03■□□□□ -0
SEC61A1P61619 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SEC61A1P61619 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEC61A1P61619 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEC61A1P61619 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEC61A1P61619 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEC61A1P61619 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms