Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 AL162727.3-201ENST00000635661 2787 ntBASIC16.33■□□□□ 0.2
PRIM2P49643 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PRIM2P49643 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.33■□□□□ 0.2
PRIM2P49643 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRIM2P49643 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
PRIM2P49643 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.32■□□□□ 0.2
PRIM2P49643 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PRIM2P49643 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.32■□□□□ 0.2
PRIM2P49643 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.32■□□□□ 0.2
PRIM2P49643 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.32■□□□□ 0.2
PRIM2P49643 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.32■□□□□ 0.2
PRIM2P49643 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.32■□□□□ 0.2
PRIM2P49643 AP005901.3-202ENST00000581653 237 ntBASIC16.32■□□□□ 0.2
PRIM2P49643 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PRIM2P49643 AL513477.1-201ENST00000602865 2407 ntBASIC16.32■□□□□ 0.2
PRIM2P49643 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.32■□□□□ 0.2
PRIM2P49643 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRIM2P49643 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRIM2P49643 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
PRIM2P49643 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRIM2P49643 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
PRIM2P49643 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.31■□□□□ 0.2
PRIM2P49643 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PRIM2P49643 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.31■□□□□ 0.2
PRIM2P49643 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.31■□□□□ 0.2
PRIM2P49643 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.31■□□□□ 0.2
PRIM2P49643 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRIM2P49643 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PRIM2P49643 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRIM2P49643 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
PRIM2P49643 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRIM2P49643 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.3■□□□□ 0.2
PRIM2P49643 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRIM2P49643 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRIM2P49643 AL049757.1-201ENST00000616842 1596 ntBASIC16.3■□□□□ 0.2
PRIM2P49643 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRIM2P49643 TP73-AS1-210ENST00000637775 1455 ntBASIC16.3■□□□□ 0.2
PRIM2P49643 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRIM2P49643 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRIM2P49643 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.3■□□□□ 0.2
PRIM2P49643 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms