Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.75■□□□□ 0.43
SCNN1AP37088 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.75■□□□□ 0.43
SCNN1AP37088 AC004790.2-201ENST00000623588 572 ntBASIC17.75■□□□□ 0.43
SCNN1AP37088 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SCNN1AP37088 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCNN1AP37088 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 LTB4R2-202ENST00000528054 3092 ntBASIC17.75■□□□□ 0.43
SCNN1AP37088 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCNN1AP37088 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.74■□□□□ 0.43
SCNN1AP37088 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCNN1AP37088 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
SCNN1AP37088 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 AC006277.1-201ENST00000624348 1610 ntBASIC17.74■□□□□ 0.43
SCNN1AP37088 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCNN1AP37088 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 AC079776.4-201ENST00000511039 504 ntBASIC17.74■□□□□ 0.43
SCNN1AP37088 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.74■□□□□ 0.43
SCNN1AP37088 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.74■□□□□ 0.43
SCNN1AP37088 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.74■□□□□ 0.43
SCNN1AP37088 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SCNN1AP37088 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 AL353732.1-201ENST00000569618 1459 ntBASIC17.74■□□□□ 0.43
SCNN1AP37088 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.74■□□□□ 0.43
SCNN1AP37088 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCNN1AP37088 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCNN1AP37088 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SCNN1AP37088 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.73■□□□□ 0.43
SCNN1AP37088 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SCNN1AP37088 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SCNN1AP37088 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.73■□□□□ 0.43
SCNN1AP37088 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.73■□□□□ 0.43
SCNN1AP37088 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.73■□□□□ 0.43
SCNN1AP37088 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.73■□□□□ 0.43
SCNN1AP37088 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.73■□□□□ 0.43
SCNN1AP37088 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.73■□□□□ 0.43
SCNN1AP37088 Z83851.2-201ENST00000609564 659 ntBASIC17.73■□□□□ 0.43
SCNN1AP37088 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.73■□□□□ 0.43
SCNN1AP37088 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.73■□□□□ 0.43
SCNN1AP37088 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.73■□□□□ 0.43
SCNN1AP37088 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCNN1AP37088 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.72■□□□□ 0.43
SCNN1AP37088 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 AC012313.1-201ENST00000593393 3059 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.72■□□□□ 0.43
SCNN1AP37088 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCNN1AP37088 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.72■□□□□ 0.43
SCNN1AP37088 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.72■□□□□ 0.43
SCNN1AP37088 HCG4-201ENST00000418983 998 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 AC026396.1-201ENST00000419388 421 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 VN2R19P-201ENST00000442399 1052 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 FAM185BP-201ENST00000443595 716 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.72■□□□□ 0.43
SCNN1AP37088 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SCNN1AP37088 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 AL645728.1-201ENST00000366221 2101 ntBASIC17.72■□□□□ 0.43
SCNN1AP37088 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCNN1AP37088 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms