Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.42■□□□□ 0.22
HTR1EP28566 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.42■□□□□ 0.22
HTR1EP28566 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HTR1EP28566 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.42■□□□□ 0.22
HTR1EP28566 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 IGHV3-41-201ENST00000613121 348 ntBASIC16.42■□□□□ 0.22
HTR1EP28566 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 HLA-A-201ENST00000376802 1334 ntBASIC16.42■□□□□ 0.22
HTR1EP28566 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.42■□□□□ 0.22
HTR1EP28566 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HTR1EP28566 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.42■□□□□ 0.22
HTR1EP28566 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 AL391005.1-201ENST00000623953 2435 ntBASIC16.41■□□□□ 0.22
HTR1EP28566 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
HTR1EP28566 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.41■□□□□ 0.22
HTR1EP28566 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.41■□□□□ 0.22
HTR1EP28566 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 AC099336.1-202ENST00000602961 463 ntBASIC16.41■□□□□ 0.22
HTR1EP28566 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HTR1EP28566 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HTR1EP28566 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HTR1EP28566 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HTR1EP28566 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.4■□□□□ 0.22
HTR1EP28566 AC092171.3-201ENST00000610122 2651 ntBASIC16.4■□□□□ 0.22
HTR1EP28566 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.4■□□□□ 0.22
HTR1EP28566 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 KRT18P13-201ENST00000400056 1290 ntBASIC16.4■□□□□ 0.22
HTR1EP28566 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.4■□□□□ 0.22
HTR1EP28566 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HTR1EP28566 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms