Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NCLP19338 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NCLP19338 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLP19338 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLP19338 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLP19338 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.43■□□□□ 0.86
NCLP19338 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLP19338 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.43■□□□□ 0.86
NCLP19338 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLP19338 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 AC005332.1-201ENST00000577698 1310 ntBASIC20.43■□□□□ 0.86
NCLP19338 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.43■□□□□ 0.86
NCLP19338 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCLP19338 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLP19338 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.42■□□□□ 0.86
NCLP19338 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.42■□□□□ 0.86
NCLP19338 AL136038.3-201ENST00000561909 1096 ntBASIC20.42■□□□□ 0.86
NCLP19338 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NCLP19338 AC083849.1-201ENST00000615227 514 ntBASIC20.42■□□□□ 0.86
NCLP19338 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NCLP19338 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.42■□□□□ 0.86
NCLP19338 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.42■□□□□ 0.86
NCLP19338 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLP19338 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLP19338 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.41■□□□□ 0.86
NCLP19338 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 AC034232.1-201ENST00000506026 1064 ntBASIC20.41■□□□□ 0.86
NCLP19338 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.41■□□□□ 0.86
NCLP19338 ZNF444P1-201ENST00000559497 298 ntBASIC20.41■□□□□ 0.86
NCLP19338 AC116407.4-201ENST00000623319 1061 ntBASIC20.41■□□□□ 0.86
NCLP19338 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLP19338 IER3-202ENST00000376377 1350 ntBASIC20.41■□□□□ 0.86
NCLP19338 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.41■□□□□ 0.86
NCLP19338 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms