Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 AC104109.2-201ENST00000602919 1418 ntBASIC20.67■□□□□ 0.9
ZKSCAN1P17029 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZKSCAN1P17029 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 AC027601.4-201ENST00000611259 610 ntBASIC20.66■□□□□ 0.9
ZKSCAN1P17029 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZKSCAN1P17029 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 AL020989.1-201ENST00000422979 469 ntBASIC20.65■□□□□ 0.9
ZKSCAN1P17029 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 PGAM5P1-201ENST00000518923 814 ntBASIC20.65■□□□□ 0.9
ZKSCAN1P17029 AC145285.3-201ENST00000564603 959 ntBASIC20.65■□□□□ 0.9
ZKSCAN1P17029 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZKSCAN1P17029 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 EGFEM1P-202ENST00000431685 1563 ntBASIC20.64■□□□□ 0.9
ZKSCAN1P17029 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZKSCAN1P17029 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.64■□□□□ 0.89
ZKSCAN1P17029 MED15P5-201ENST00000423150 992 ntBASIC20.64■□□□□ 0.89
ZKSCAN1P17029 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms