Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHGBP05060 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 AC092171.3-201ENST00000610122 2651 ntBASIC20.48■□□□□ 0.87
CHGBP05060 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.48■□□□□ 0.87
CHGBP05060 AC106886.4-201ENST00000623557 2502 ntBASIC20.48■□□□□ 0.87
CHGBP05060 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CHGBP05060 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
CHGBP05060 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 AC092919.2-201ENST00000623631 1645 ntBASIC20.47■□□□□ 0.87
CHGBP05060 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.47■□□□□ 0.87
CHGBP05060 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CHGBP05060 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 AC004877.2-201ENST00000623941 599 ntBASIC20.47■□□□□ 0.87
CHGBP05060 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 AC105020.1-201ENST00000435356 2205 ntBASIC20.47■□□□□ 0.87
CHGBP05060 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHGBP05060 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.47■□□□□ 0.87
CHGBP05060 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.47■□□□□ 0.87
CHGBP05060 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHGBP05060 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 AC011676.5-201ENST00000624864 2660 ntBASIC20.46■□□□□ 0.87
CHGBP05060 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CHGBP05060 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.46■□□□□ 0.87
CHGBP05060 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.46■□□□□ 0.87
CHGBP05060 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHGBP05060 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.46■□□□□ 0.87
CHGBP05060 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHGBP05060 AL645728.1-201ENST00000366221 2101 ntBASIC20.46■□□□□ 0.87
CHGBP05060 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 RHOQP3-201ENST00000437982 621 ntBASIC20.46■□□□□ 0.87
CHGBP05060 CXCL1P1-201ENST00000502804 216 ntBASIC20.46■□□□□ 0.87
CHGBP05060 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.46■□□□□ 0.87
CHGBP05060 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.46■□□□□ 0.87
CHGBP05060 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.46■□□□□ 0.87
CHGBP05060 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHGBP05060 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 PMS2P7-201ENST00000506558 1336 ntBASIC20.46■□□□□ 0.87
CHGBP05060 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHGBP05060 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
CHGBP05060 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
CHGBP05060 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.45■□□□□ 0.86
CHGBP05060 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.45■□□□□ 0.86
CHGBP05060 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.45■□□□□ 0.86
CHGBP05060 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CHGBP05060 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.45■□□□□ 0.86
CHGBP05060 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.45■□□□□ 0.86
CHGBP05060 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.45■□□□□ 0.86
CHGBP05060 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CHGBP05060 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.45■□□□□ 0.86
CHGBP05060 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.45■□□□□ 0.86
CHGBP05060 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHGBP05060 AC025580.3-201ENST00000617932 1424 ntBASIC20.44■□□□□ 0.86
CHGBP05060 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHGBP05060 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.44■□□□□ 0.86
CHGBP05060 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms