Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC3P02656 AL160286.2-201ENST00000567150 934 ntBASIC13.75□□□□□ -0.21
APOC3P02656 ABHD17AP5-201ENST00000580133 923 ntBASIC13.75□□□□□ -0.21
APOC3P02656 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
APOC3P02656 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APOC3P02656 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
APOC3P02656 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC3P02656 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APOC3P02656 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC3P02656 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC3P02656 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.74□□□□□ -0.21
APOC3P02656 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.74□□□□□ -0.21
APOC3P02656 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOC3P02656 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC3P02656 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOC3P02656 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC3P02656 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOC3P02656 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOC3P02656 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.73□□□□□ -0.21
APOC3P02656 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOC3P02656 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
APOC3P02656 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOC3P02656 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC3P02656 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC3P02656 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC3P02656 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms