Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV5A0A0B4J249 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AC005332.3-201ENST00000589904 676 ntBASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AC011558.1-201ENST00000623459 338 ntBASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV5A0A0B4J249 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 EGFEM1P-202ENST00000431685 1563 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 MIR662-201ENST00000384847 95 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 STARP1-201ENST00000397973 869 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 LIN28AP1-201ENST00000429574 405 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AC007967.3-201ENST00000434308 558 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AC010203.1-204ENST00000548782 407 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 AL031432.5-201ENST00000641059 760 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 CYP2T1P-202ENST00000641596 2535 ntBASIC13.34□□□□□ -0.27
TRAV5A0A0B4J249 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms