Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 AC116407.4-201ENST00000623319 1061 ntBASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 AC078925.2-201ENST00000624013 1973 ntBASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 IER3-202ENST00000376377 1350 ntBASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4B1Q9Y6B7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 KRT89P-201ENST00000620027 1478 ntBASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 KRT18P48-201ENST00000434763 852 ntBASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4B1Q9Y6B7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4B1Q9Y6B7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms