Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AC005237.2-201ENST00000434368 219 ntBASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 DUX4L17-201ENST00000557360 1267 ntBASIC17.78■□□□□ 0.44
YIPF1Q9Y548 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AL161645.1-201ENST00000622716 1255 ntBASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 AKAP8P1-201ENST00000434743 1349 ntBASIC17.77■□□□□ 0.44
YIPF1Q9Y548 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 AL592309.1-201ENST00000443127 649 ntBASIC17.77■□□□□ 0.44
YIPF1Q9Y548 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 AC109635.5-201ENST00000533593 962 ntBASIC17.77■□□□□ 0.44
YIPF1Q9Y548 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 AC243562.1-201ENST00000560672 389 ntBASIC17.77■□□□□ 0.44
YIPF1Q9Y548 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.77■□□□□ 0.44
YIPF1Q9Y548 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
YIPF1Q9Y548 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AC025678.2-201ENST00000562061 970 ntBASIC17.76■□□□□ 0.43
YIPF1Q9Y548 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AC138932.1-201ENST00000534164 6830 ntBASIC17.76■□□□□ 0.43
YIPF1Q9Y548 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 FRMD8P1-201ENST00000440433 1524 ntBASIC17.76■□□□□ 0.43
YIPF1Q9Y548 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YIPF1Q9Y548 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
YIPF1Q9Y548 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms