Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NLKQ9UBE8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NLKQ9UBE8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 NFIC-211ENST00000641145 8399 ntBASIC15.26■□□□□ 0.03
NLKQ9UBE8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NLKQ9UBE8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
NLKQ9UBE8 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
NLKQ9UBE8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 HBZP1-201ENST00000354915 429 ntBASIC15.25■□□□□ 0.03
NLKQ9UBE8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 KRT18P48-201ENST00000434763 852 ntBASIC15.25■□□□□ 0.03
NLKQ9UBE8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 AL049597.2-201ENST00000565575 961 ntBASIC15.25■□□□□ 0.03
NLKQ9UBE8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 KRT89P-201ENST00000620027 1478 ntBASIC15.25■□□□□ 0.03
NLKQ9UBE8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NLKQ9UBE8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
NLKQ9UBE8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NLKQ9UBE8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NLKQ9UBE8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NLKQ9UBE8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NLKQ9UBE8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms