Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM60Q9H2L4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM60Q9H2L4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM60Q9H2L4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM60Q9H2L4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 AP001005.1-201ENST00000571755 1248 ntBASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 PI4KAP1-204ENST00000612579 1703 ntBASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 NKILA-202ENST00000614771 2598 ntBASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM60Q9H2L4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 SLC25A6P2-201ENST00000497974 877 ntBASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
TMEM60Q9H2L4 AGGF1P2-201ENST00000426656 2106 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 AC011676.5-201ENST00000624864 2660 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 BCL2-203ENST00000589955 5011 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 RPS2P28-201ENST00000314255 741 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 AC098831.1-202ENST00000438821 336 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 AC087163.2-201ENST00000457299 853 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 IGHV3-65-201ENST00000523210 341 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 AL662844.1-201ENST00000546340 181 ntBASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TMEM60Q9H2L4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms