Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YME1L1Q96TA2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 AC004408.2-201ENST00000623613 2777 ntBASIC18.3■□□□□ 0.52
YME1L1Q96TA2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 GK-202ENST00000378941 458 ntTSL 3 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YME1L1Q96TA2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 AC109635.5-201ENST00000533593 962 ntBASIC18.29■□□□□ 0.52
YME1L1Q96TA2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
YME1L1Q96TA2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YME1L1Q96TA2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms