Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 KRTAP19-9P-201ENST00000421795 191 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC091167.2-201ENST00000579581 588 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PTPN20CP-201ENST00000614090 920 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC015912.3-201ENST00000619432 348 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TPM3P8-201ENST00000330554 643 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL133267.1-201ENST00000398220 340 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL645728.2-202ENST00000641679 227 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC009336.1-201ENST00000608941 1553 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC127024.7-201ENST00000625101 200 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CYP51A1P3-201ENST00000400072 1428 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 ZBTB12BP-201ENST00000314232 1122 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 NME4-207ENST00000450036 985 ntTSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AL157792.1-201ENST00000488281 530 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMCN1Q96RW7 TIMM17BP1-201ENST00000545713 516 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 DNM1P51-201ENST00000558149 522 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 AC018695.6-201ENST00000614011 534 ntBASIC5.11□□□□□ -1.59
HMCN1Q96RW7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms