Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKL2Q92772 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL2Q92772 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL2Q92772 KLF4P1-201ENST00000412782 1185 ntBASIC17.33■□□□□ 0.36
CDKL2Q92772 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL2Q92772 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDKL2Q92772 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKL2Q92772 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL2Q92772 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDKL2Q92772 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDKL2Q92772 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKL2Q92772 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKL2Q92772 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 DUX4L26-201ENST00000489078 1255 ntBASIC17.32■□□□□ 0.36
CDKL2Q92772 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKL2Q92772 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.32■□□□□ 0.36
CDKL2Q92772 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 RNF216P1-203ENST00000404404 2427 ntBASIC17.32■□□□□ 0.36
CDKL2Q92772 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CDKL2Q92772 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL2Q92772 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL2Q92772 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.31■□□□□ 0.36
CDKL2Q92772 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CDKL2Q92772 AP002490.2-201ENST00000524791 560 ntBASIC17.31■□□□□ 0.36
CDKL2Q92772 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKL2Q92772 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CDKL2Q92772 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKL2Q92772 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKL2Q92772 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDKL2Q92772 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKL2Q92772 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms