Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 MIR943-201ENST00000401286 94 ntBASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CASKIN1Q8WXD9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 SNX33P1-201ENST00000592116 1762 ntBASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 UGT1A2P-201ENST00000454886 866 ntBASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TUBB8P12-201ENST00000308911 1335 ntBASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TUBB7P-202ENST00000428444 1305 ntBASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TUBB8P7-204ENST00000567960 1332 ntBASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC26.28■■□□□ 1.8
CASKIN1Q8WXD9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 MIR4745-201ENST00000577608 62 ntBASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC26.27■■□□□ 1.8
CASKIN1Q8WXD9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC26.26■■□□□ 1.79
CASKIN1Q8WXD9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 FST-202ENST00000396947 2538 ntTSL 5 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CASKIN1Q8WXD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC26.24■■□□□ 1.79
CASKIN1Q8WXD9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
CASKIN1Q8WXD9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CASKIN1Q8WXD9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms