Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 AC073621.1-201ENST00000392730 636 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 FDX1P1-201ENST00000449115 551 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 AL356488.2-201ENST00000602755 427 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 MIR7706-201ENST00000613747 67 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 AL805961.1-202ENST00000641562 540 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 LINC02012-201ENST00000608206 1725 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 AC006504.4-201ENST00000592118 1568 ntBASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC12Q8WUD4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 HLA-A-201ENST00000376802 1334 ntBASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 TNRC18P3-201ENST00000441896 2691 ntBASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 AP002414.1-201ENST00000391405 1147 ntBASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 RNA5SP419-201ENST00000515908 135 ntBASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 AC005593.1-201ENST00000624894 515 ntBASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC12Q8WUD4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC12Q8WUD4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 AC012640.2-201ENST00000561606 901 ntBASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 AD000864.1-201ENST00000624076 2295 ntBASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC12Q8WUD4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC12Q8WUD4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC12Q8WUD4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC12Q8WUD4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms