Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AK4P3-201ENST00000418260 669 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC112907.2-201ENST00000448639 330 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 KRT18P38-201ENST00000449496 1282 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC092647.4-201ENST00000457211 535 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC005332.3-201ENST00000589904 676 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 HYMAI.1-201ENST00000620949 238 ntBASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DNAAF1Q8NEP3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 LINC01023-201ENST00000606054 436 ntBASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DNAAF1Q8NEP3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms