Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AL024508.2-201ENST00000607749 1894 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 AC006538.1-201ENST00000567905 1585 ntBASIC15.58■□□□□ 0.08
CROCCP3Q8IVE0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 GUSBP6-202ENST00000438529 1198 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 AC006970.2-201ENST00000450065 779 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 AP002982.1-201ENST00000492365 877 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 AL138781.1-201ENST00000566567 1274 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 MIR3180-4-201ENST00000582223 153 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 AC013268.4-201ENST00000637413 2228 ntBASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CROCCP3Q8IVE0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 AC099343.3-201ENST00000605834 2503 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 KRT17P3-201ENST00000420566 1262 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 AC008687.5-201ENST00000593746 558 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 KRT16P1-201ENST00000399124 1418 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 AL359258.3-201ENST00000622910 2331 ntBASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CROCCP3Q8IVE0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CROCCP3Q8IVE0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms