Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 AC079140.1-201ENST00000508039 487 ntBASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 MIR6752-201ENST00000618442 71 ntBASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 PIN1P1-201ENST00000412108 996 ntBASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 AL009183.1-201ENST00000603760 355 ntBASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SDK1Q7Z5N4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 FO538757.1-201ENST00000623083 1397 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 CR383656.12-201ENST00000549567 513 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 AC026120.1-201ENST00000611536 926 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 WASH6P-202ENST00000359512 1437 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 MRPS18AP1-201ENST00000414458 589 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 AL355306.1-201ENST00000415580 579 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 TSSK5P-201ENST00000423978 907 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 RARRES2P8-201ENST00000566335 367 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 MIR4453-201ENST00000584019 89 ntBASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SDK1Q7Z5N4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AC098818.2-201ENST00000564925 2320 ntBASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AP000842.3-202ENST00000569238 1080 ntBASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SDK1Q7Z5N4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms