Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 AL137013.1-201ENST00000432946 1228 ntBASIC17.31■□□□□ 0.36
LGSNQ5TDP6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 AL049757.1-201ENST00000616842 1596 ntBASIC17.31■□□□□ 0.36
LGSNQ5TDP6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LGSNQ5TDP6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 FAM220CP-201ENST00000395253 831 ntBASIC17.3■□□□□ 0.36
LGSNQ5TDP6 AC087499.1-201ENST00000418141 1075 ntBASIC17.3■□□□□ 0.36
LGSNQ5TDP6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 STK25P1-201ENST00000585406 838 ntBASIC17.3■□□□□ 0.36
LGSNQ5TDP6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.3■□□□□ 0.36
LGSNQ5TDP6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 GPR89P-201ENST00000407924 1495 ntBASIC17.3■□□□□ 0.36
LGSNQ5TDP6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LGSNQ5TDP6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 PCDH8P1-201ENST00000428983 2773 ntBASIC17.29■□□□□ 0.36
LGSNQ5TDP6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 AC006449.5-201ENST00000610658 2098 ntBASIC17.29■□□□□ 0.36
LGSNQ5TDP6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
LGSNQ5TDP6 AC125634.1-201ENST00000438758 1403 ntBASIC17.29■□□□□ 0.36
LGSNQ5TDP6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGSNQ5TDP6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LGSNQ5TDP6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms