Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTC1Q2NKJ3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 GK-202ENST00000378941 458 ntTSL 3 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 AC055876.3-201ENST00000431496 288 ntBASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 AC138649.4-201ENST00000612222 287 ntBASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 AC009336.1-201ENST00000608941 1553 ntBASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
CTC1Q2NKJ3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 PHGDH-209ENST00000641074 1780 ntBASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AC236430.1-201ENST00000402231 743 ntBASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AC002472.2-201ENST00000442739 958 ntBASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 RN7SL204P-201ENST00000582831 262 ntBASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CTC1Q2NKJ3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 MIR661-201ENST00000384842 89 ntBASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 TERF1P3-201ENST00000505638 1227 ntBASIC18.27■□□□□ 0.52
CTC1Q2NKJ3 AL512356.2-201ENST00000546955 174 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms