Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 AC008741.2-201ENST00000612792 3115 ntBASIC13.19□□□□□ -0.3
HIST1H1AQ02539 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H1AQ02539 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.18□□□□□ -0.3
HIST1H1AQ02539 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 AL136379.1-201ENST00000623471 2642 ntBASIC13.18□□□□□ -0.3
HIST1H1AQ02539 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 AL671277.2-201ENST00000458060 996 ntBASIC13.18□□□□□ -0.3
HIST1H1AQ02539 AC022616.7-201ENST00000525383 220 ntBASIC13.18□□□□□ -0.3
HIST1H1AQ02539 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1AQ02539 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 AC104076.2-201ENST00000448912 469 ntBASIC13.17□□□□□ -0.3
HIST1H1AQ02539 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 GUSBP12-201ENST00000513727 720 ntBASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 RNF126P1-202ENST00000569893 925 ntBASIC13.17□□□□□ -0.3
HIST1H1AQ02539 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 HYMAI.1-201ENST00000620949 238 ntBASIC13.17□□□□□ -0.3
HIST1H1AQ02539 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HIST1H1AQ02539 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms