Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL121894.2-201ENST00000602977 491 ntBASIC12.76□□□□□ -0.37
CMC4P56277 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.76□□□□□ -0.37
CMC4P56277 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.76□□□□□ -0.37
CMC4P56277 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.76□□□□□ -0.37
CMC4P56277 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.76□□□□□ -0.37
CMC4P56277 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.76□□□□□ -0.37
CMC4P56277 AC018470.1-201ENST00000624790 3129 ntBASIC12.76□□□□□ -0.37
CMC4P56277 AC006504.4-201ENST00000592118 1568 ntBASIC12.76□□□□□ -0.37
CMC4P56277 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CMC4P56277 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.76□□□□□ -0.37
CMC4P56277 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CMC4P56277 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CMC4P56277 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CMC4P56277 AC007613.1-201ENST00000572811 2597 ntBASIC12.76□□□□□ -0.37
CMC4P56277 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CMC4P56277 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.75□□□□□ -0.37
CMC4P56277 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.75□□□□□ -0.37
CMC4P56277 CRYGEP-201ENST00000412192 528 ntBASIC12.75□□□□□ -0.37
CMC4P56277 AL590627.1-203ENST00000421194 1026 ntBASIC12.75□□□□□ -0.37
CMC4P56277 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.75□□□□□ -0.37
CMC4P56277 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 LINC02012-201ENST00000608206 1725 ntBASIC12.75□□□□□ -0.37
CMC4P56277 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.75□□□□□ -0.37
CMC4P56277 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.75□□□□□ -0.37
CMC4P56277 AC148477.8-201ENST00000624298 468 ntBASIC12.75□□□□□ -0.37
CMC4P56277 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CMC4P56277 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CMC4P56277 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CMC4P56277 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.75□□□□□ -0.37
CMC4P56277 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 ELK2BP-201ENST00000415014 1224 ntBASIC12.74□□□□□ -0.37
CMC4P56277 AC098831.1-202ENST00000438821 336 ntBASIC12.74□□□□□ -0.37
CMC4P56277 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.74□□□□□ -0.37
CMC4P56277 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms