Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDH8P55286 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDH8P55286 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH8P55286 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 LTB4R2-202ENST00000528054 3092 ntBASIC18.26■□□□□ 0.51
CDH8P55286 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CDH8P55286 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 AC087163.2-201ENST00000457299 853 ntBASIC18.26■□□□□ 0.51
CDH8P55286 SLC25A6P2-201ENST00000497974 877 ntBASIC18.26■□□□□ 0.51
CDH8P55286 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.26■□□□□ 0.51
CDH8P55286 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.26■□□□□ 0.51
CDH8P55286 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 GGTLC5P-201ENST00000617623 998 ntBASIC18.26■□□□□ 0.51
CDH8P55286 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH8P55286 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDH8P55286 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH8P55286 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH8P55286 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CDH8P55286 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CDH8P55286 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 AC007967.2-201ENST00000432613 625 ntBASIC18.25■□□□□ 0.51
CDH8P55286 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH8P55286 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH8P55286 MIR4751-201ENST00000578027 74 ntBASIC18.25■□□□□ 0.51
CDH8P55286 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.25■□□□□ 0.51
CDH8P55286 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH8P55286 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH8P55286 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH8P55286 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH8P55286 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH8P55286 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CDH8P55286 MRPL20P1-201ENST00000400819 433 ntBASIC18.24■□□□□ 0.51
CDH8P55286 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.24■□□□□ 0.51
CDH8P55286 AL671883.3-201ENST00000603274 991 ntBASIC18.24■□□□□ 0.51
CDH8P55286 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH8P55286 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 ZNF259P1-201ENST00000407656 1365 ntBASIC18.24■□□□□ 0.51
CDH8P55286 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH8P55286 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH8P55286 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH8P55286 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH8P55286 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms