Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 RN7SL606P-201ENST00000472779 293 ntBASIC15.13■□□□□ 0.01
CCR9P51686 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCR9P51686 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 LINC00554-201ENST00000564841 3011 ntBASIC15.13■□□□□ 0.01
CCR9P51686 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 RNF216P1-203ENST00000404404 2427 ntBASIC15.13■□□□□ 0.01
CCR9P51686 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCR9P51686 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.12■□□□□ 0.01
CCR9P51686 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.12■□□□□ 0.01
CCR9P51686 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.12■□□□□ 0.01
CCR9P51686 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 AL353593.2-201ENST00000602529 1483 ntBASIC15.12■□□□□ 0.01
CCR9P51686 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.12■□□□□ 0.01
CCR9P51686 AC022188.1-201ENST00000620960 1664 ntBASIC15.12■□□□□ 0.01
CCR9P51686 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCR9P51686 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCR9P51686 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCR9P51686 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCR9P51686 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.11■□□□□ 0.01
CCR9P51686 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 CYP2T1P-202ENST00000641596 2535 ntBASIC15.11■□□□□ 0.01
CCR9P51686 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 KRT8P10-201ENST00000450021 1447 ntBASIC15.11■□□□□ 0.01
CCR9P51686 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.11■□□□□ 0.01
CCR9P51686 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.11■□□□□ 0.01
CCR9P51686 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.11■□□□□ 0.01
CCR9P51686 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.11■□□□□ 0.01
CCR9P51686 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.11■□□□□ 0.01
CCR9P51686 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.11■□□□□ 0.01
CCR9P51686 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.11■□□□□ 0.01
CCR9P51686 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCR9P51686 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.11■□□□□ 0.01
CCR9P51686 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.11■□□□□ 0.01
CCR9P51686 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.11■□□□□ 0.01
CCR9P51686 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.11■□□□□ 0.01
CCR9P51686 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms