Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.92□□□□□ -0.66
UBE2AP49459 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 AC011840.4-201ENST00000578471 627 ntBASIC10.92□□□□□ -0.66
UBE2AP49459 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.92□□□□□ -0.66
UBE2AP49459 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UBE2AP49459 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
UBE2AP49459 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UBE2AP49459 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC10.91□□□□□ -0.66
UBE2AP49459 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2AP49459 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC10.91□□□□□ -0.66
UBE2AP49459 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 AL049597.2-201ENST00000565575 961 ntBASIC10.91□□□□□ -0.66
UBE2AP49459 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 AC124864.1-201ENST00000623408 392 ntBASIC10.91□□□□□ -0.66
UBE2AP49459 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 AC108860.2-201ENST00000562760 2183 ntBASIC10.91□□□□□ -0.66
UBE2AP49459 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 PC-208ENST00000529047 1607 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2AP49459 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2AP49459 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2AP49459 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2AP49459 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 AC009053.2-201ENST00000563701 2365 ntBASIC10.9□□□□□ -0.66
UBE2AP49459 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UBE2AP49459 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2AP49459 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2AP49459 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms