Protein–RNA interactions for Protein: P0CW27

CCDC166, Coiled-coil domain-containing protein 166, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC166P0CW27 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 TPSP2-201ENST00000561760 610 ntBASIC17.08■□□□□ 0.32
CCDC166P0CW27 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC166P0CW27 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC166P0CW27 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 IER3-202ENST00000376377 1350 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 KLF4P1-201ENST00000412782 1185 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 KRT17P6-201ENST00000453795 1220 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 TOB2P1-201ENST00000469761 992 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 AP002414.4-201ENST00000589764 1148 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 AC073592.5-201ENST00000624854 528 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 AL590326.2-201ENST00000625139 305 ntBASIC17.07■□□□□ 0.32
CCDC166P0CW27 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC166P0CW27 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC166P0CW27 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 AC124947.2-201ENST00000547118 1133 ntBASIC17.06■□□□□ 0.32
CCDC166P0CW27 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 UBALD1-205ENST00000590891 2641 ntBASIC17.06■□□□□ 0.32
CCDC166P0CW27 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 NSUN5P1-202ENST00000421140 1535 ntBASIC17.06■□□□□ 0.32
CCDC166P0CW27 NSUN5P2-203ENST00000457352 1529 ntBASIC17.06■□□□□ 0.32
CCDC166P0CW27 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCDC166P0CW27 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC166P0CW27 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC166P0CW27 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC166P0CW27 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC166P0CW27 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC166P0CW27 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC166P0CW27 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms