Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 FAM185BP-201ENST00000443595 716 ntBASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 CEND1P1-201ENST00000451006 455 ntBASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AL078644.1-201ENST00000609881 752 ntBASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AL596442.2-201ENST00000610240 980 ntBASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40ALP0C0E4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB40ALP0C0E4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40ALP0C0E4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 CNN2P11-201ENST00000429351 262 ntBASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40ALP0C0E4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms