Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC6P09630 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 HCG4-201ENST00000418983 998 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 SLC25A6P5-201ENST00000435663 894 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXC6P09630 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXC6P09630 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC6P09630 MIR3909-201ENST00000579518 119 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 AC008267.7-201ENST00000624570 1194 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC6P09630 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 AC007613.1-201ENST00000572811 2597 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 LYSMD4-203ENST00000378904 2122 ntBASIC19.24■□□□□ 0.67
HOXC6P09630 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HOXC6P09630 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC6P09630 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 GAPDHP21-201ENST00000450301 1010 ntBASIC19.23■□□□□ 0.67
HOXC6P09630 AC097493.3-201ENST00000509725 367 ntBASIC19.23■□□□□ 0.67
HOXC6P09630 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC6P09630 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 AL390754.1-201ENST00000619088 582 ntBASIC19.23■□□□□ 0.67
HOXC6P09630 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXC6P09630 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
HOXC6P09630 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC6P09630 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC6P09630 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HOXC6P09630 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC6P09630 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXC6P09630 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXC6P09630 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 AC069120.2-201ENST00000524091 540 ntBASIC19.22■□□□□ 0.67
HOXC6P09630 ALG1L8P-201ENST00000533887 760 ntBASIC19.22■□□□□ 0.67
HOXC6P09630 AP000842.3-202ENST00000569238 1080 ntBASIC19.22■□□□□ 0.67
HOXC6P09630 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC6P09630 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXC6P09630 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXC6P09630 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC6P09630 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXC6P09630 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXC6P09630 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC6P09630 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC6P09630 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC6P09630 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HOXC6P09630 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXC6P09630 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.21■□□□□ 0.67
HOXC6P09630 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.21■□□□□ 0.67
HOXC6P09630 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC6P09630 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC6P09630 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms