Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGN1P05114 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGN1P05114 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGN1P05114 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGN1P05114 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HMGN1P05114 CICP6-201ENST00000457191 2729 ntBASIC15.56■□□□□ 0.08
HMGN1P05114 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGN1P05114 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 KRT8P10-201ENST00000450021 1447 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGN1P05114 RNF152P1-201ENST00000397754 604 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 AC113347.1-201ENST00000413321 391 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 AC117947.1-201ENST00000427448 529 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 AC112907.2-201ENST00000448639 330 ntBASIC15.55■□□□□ 0.08
HMGN1P05114 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.55■□□□□ 0.08
HMGN1P05114 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGN1P05114 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGN1P05114 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGN1P05114 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 FRMD8P1-201ENST00000440433 1524 ntBASIC15.54■□□□□ 0.08
HMGN1P05114 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGN1P05114 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 VENTXP5-201ENST00000523979 775 ntBASIC15.54■□□□□ 0.08
HMGN1P05114 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 AC006449.5-201ENST00000610658 2098 ntBASIC15.54■□□□□ 0.08
HMGN1P05114 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 CYP2T1P-202ENST00000641596 2535 ntBASIC15.54■□□□□ 0.08
HMGN1P05114 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGN1P05114 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGN1P05114 AL135999.2-201ENST00000622438 1686 ntBASIC15.54■□□□□ 0.08
HMGN1P05114 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms