Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.68■□□□□ 0.74
MBD3O95983 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.68■□□□□ 0.74
MBD3O95983 NAPSB-206ENST00000562112 1266 ntBASIC19.68■□□□□ 0.74
MBD3O95983 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.68■□□□□ 0.74
MBD3O95983 AC010947.1-201ENST00000623454 693 ntBASIC19.68■□□□□ 0.74
MBD3O95983 AC006538.1-201ENST00000567905 1585 ntBASIC19.68■□□□□ 0.74
MBD3O95983 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MBD3O95983 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3O95983 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.68■□□□□ 0.74
MBD3O95983 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 AP003733.1-201ENST00000491725 852 ntBASIC19.67■□□□□ 0.74
MBD3O95983 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.67■□□□□ 0.74
MBD3O95983 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.67■□□□□ 0.74
MBD3O95983 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MBD3O95983 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MBD3O95983 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3O95983 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
MBD3O95983 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD3O95983 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD3O95983 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
MBD3O95983 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 AC111152.3-201ENST00000569699 673 ntBASIC19.66■□□□□ 0.74
MBD3O95983 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
MBD3O95983 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD3O95983 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 ME2P1-201ENST00000426028 1970 ntBASIC19.66■□□□□ 0.74
MBD3O95983 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD3O95983 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3O95983 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3O95983 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms