Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.08■□□□□ 0.16
HCN1O60741 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HCN1O60741 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.08■□□□□ 0.16
HCN1O60741 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
HCN1O60741 AP005117.1-201ENST00000584346 1413 ntBASIC16.08■□□□□ 0.16
HCN1O60741 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HCN1O60741 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.07■□□□□ 0.16
HCN1O60741 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.07■□□□□ 0.16
HCN1O60741 FGFR3P6-201ENST00000457012 610 ntBASIC16.07■□□□□ 0.16
HCN1O60741 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 AC073648.2-201ENST00000510116 352 ntBASIC16.07■□□□□ 0.16
HCN1O60741 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.07■□□□□ 0.16
HCN1O60741 AP001005.1-201ENST00000571755 1248 ntBASIC16.07■□□□□ 0.16
HCN1O60741 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.07■□□□□ 0.16
HCN1O60741 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 AP001269.4-201ENST00000609611 512 ntBASIC16.07■□□□□ 0.16
HCN1O60741 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.07■□□□□ 0.16
HCN1O60741 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HCN1O60741 HLA-A-201ENST00000376802 1334 ntBASIC16.07■□□□□ 0.16
HCN1O60741 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCN1O60741 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCN1O60741 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.07■□□□□ 0.16
HCN1O60741 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCN1O60741 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.07■□□□□ 0.16
HCN1O60741 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HCN1O60741 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
HCN1O60741 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 BX276092.7-203ENST00000637198 1536 ntBASIC16.06■□□□□ 0.16
HCN1O60741 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 AC007967.3-201ENST00000434308 558 ntBASIC16.06■□□□□ 0.16
HCN1O60741 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.06■□□□□ 0.16
HCN1O60741 AC122714.2-201ENST00000502787 707 ntBASIC16.06■□□□□ 0.16
HCN1O60741 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.06■□□□□ 0.16
HCN1O60741 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
HCN1O60741 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.06■□□□□ 0.16
HCN1O60741 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCN1O60741 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HCN1O60741 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms