Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD2O14647 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.44■■□□□ 1.34
CHD2O14647 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD2O14647 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC23.43■■□□□ 1.34
CHD2O14647 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.43■■□□□ 1.34
CHD2O14647 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHD2O14647 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CHD2O14647 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.43■■□□□ 1.34
CHD2O14647 KRT223P-202ENST00000449164 1292 ntBASIC23.43■■□□□ 1.34
CHD2O14647 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC23.43■■□□□ 1.34
CHD2O14647 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC23.43■■□□□ 1.34
CHD2O14647 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC23.43■■□□□ 1.34
CHD2O14647 AC008735.3-201ENST00000596646 500 ntBASIC23.43■■□□□ 1.34
CHD2O14647 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC23.43■■□□□ 1.34
CHD2O14647 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC23.43■■□□□ 1.34
CHD2O14647 AC073439.1-201ENST00000624121 1774 ntBASIC23.43■■□□□ 1.34
CHD2O14647 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD2O14647 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC23.43■■□□□ 1.34
CHD2O14647 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CHD2O14647 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHD2O14647 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHD2O14647 RNA5SP410-201ENST00000516285 106 ntBASIC23.43■■□□□ 1.34
CHD2O14647 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.43■■□□□ 1.34
CHD2O14647 AC105021.1-202ENST00000570572 669 ntBASIC23.43■■□□□ 1.34
CHD2O14647 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.43■■□□□ 1.34
CHD2O14647 AP001350.2-201ENST00000625104 1094 ntBASIC23.43■■□□□ 1.34
CHD2O14647 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD2O14647 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD2O14647 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD2O14647 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD2O14647 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD2O14647 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CHD2O14647 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC23.42■■□□□ 1.34
CHD2O14647 AC022210.1-201ENST00000449856 793 ntBASIC23.42■■□□□ 1.34
CHD2O14647 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD2O14647 SIGLEC29P-201ENST00000599873 1114 ntBASIC23.42■■□□□ 1.34
CHD2O14647 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC23.42■■□□□ 1.34
CHD2O14647 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.42■■□□□ 1.34
CHD2O14647 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHD2O14647 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD2O14647 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
CHD2O14647 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD2O14647 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC23.41■■□□□ 1.34
CHD2O14647 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD2O14647 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHD2O14647 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.41■■□□□ 1.34
CHD2O14647 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC23.4■■□□□ 1.34
CHD2O14647 AC114501.2-201ENST00000439631 535 ntBASIC23.4■■□□□ 1.34
CHD2O14647 RN7SL752P-201ENST00000463779 287 ntBASIC23.4■■□□□ 1.34
CHD2O14647 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC23.4■■□□□ 1.34
CHD2O14647 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 AC099568.2-201ENST00000609194 695 ntBASIC23.4■■□□□ 1.34
CHD2O14647 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD2O14647 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CHD2O14647 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 ANKRD19P-201ENST00000338192 862 ntBASIC23.4■■□□□ 1.34
CHD2O14647 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 MPV17-208ENST00000405076 603 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD2O14647 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD2O14647 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.4■■□□□ 1.34
CHD2O14647 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.4■■□□□ 1.34
CHD2O14647 AP005482.1-201ENST00000563722 1273 ntBASIC23.4■■□□□ 1.34
CHD2O14647 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC23.4■■□□□ 1.34
CHD2O14647 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CHD2O14647 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
CHD2O14647 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC23.39■■□□□ 1.34
CHD2O14647 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD2O14647 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CHD2O14647 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC23.39■■□□□ 1.34
CHD2O14647 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.39■■□□□ 1.34
CHD2O14647 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD2O14647 KRT8P49-201ENST00000604166 1432 ntBASIC23.39■■□□□ 1.34
CHD2O14647 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.39■■□□□ 1.33
CHD2O14647 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC23.39■■□□□ 1.33
CHD2O14647 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms